CDS
| Accession Number | TCMCG006C101232 |
| gbkey | CDS |
| Protein Id | XP_013666764.1 |
| Location | join(80618..80812,81235..81277,81417..81506,81600..81675,81832..81901,82025..82174,82262..82366,82450..82596,82707..82782,82921..83009,83085..83176,83323..83365,83474..83530) |
| Gene | LOC106371265 |
| GeneID | 106371265 |
| Organism | Brassica napus |
Protein
| Length | 410aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013811310.2 |
| Definition | squalene synthase 1 isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | I |
| Description | squalene |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00702
[VIEW IN KEGG] R02872 [VIEW IN KEGG] R06223 [VIEW IN KEGG] |
| KEGG_rclass |
RC00362
[VIEW IN KEGG] RC00796 [VIEW IN KEGG] RC02839 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01006 [VIEW IN KEGG] |
| KEGG_ko |
ko:K00801
[VIEW IN KEGG] |
| EC |
2.5.1.21
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00100
[VIEW IN KEGG] ko00909 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko01110 [VIEW IN KEGG] ko01130 [VIEW IN KEGG] map00100 [VIEW IN KEGG] map00909 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map01110 [VIEW IN KEGG] map01130 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGAGCTTGGGGACGTTTCTGAGATATCCTGATGACGTATATCCTCTCTTGAAGATGAAGCGAGCGATCGAGAAAGCGGAGAAGCAGATCCCTCCCGAGCCACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTTTCTCGAAGCTTCTCTCTCGTTATTCAGCAGCTAGGTACCGACCTCCGTAACGCTGTGTGTGTGTTCTACTTGGTTCTCCGAGCTCTTGATACTGTCGAGGATGACACAAGCATACCAACTGATGAGAAGCTGCCCATCTTGATTGCCTTCCACCGTCACATCTACGATACTGACTGGCACTATTCATGTGGCACGAAGGAGTACAAGGTTCTGATGGACCAATTTCACCATGTTGCTGCAGCTTTTCTGGAACTTGAAAAAGGGTATCAAGAGGCTATCGAGGAAATTACTAAAAGAATGGGTGCAGGGATGGCCAAGTTTATCTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTACTGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTCTCTAAACTCTTCCTCGCTTCCGGATCAGAAGTTTTGTTGCCAGATTGGGAGCAGATTTCCAATTCAATGGGTTTATTTCTTCAGAAAACAAACATTATCAGAGATTATCTTGAGGACATTAATGAAATACCAAAGTCCCGCATGTTTTGGCCTCGCAAGATTTGGGGCAAGTATGCTGACAAGCTTGAGGACTTGAAATACGAGGAGAATTCGACGAAAGCGGTGCATTGCTTGAATGAAATGGTCACCAATGCATTGACGCATATTGAAGATTGCCTCAAGTACATGGCTGCCTTGCGTGATCCTTCTATATTTCGGTTCTGTGCTATCCCTCAGATCATGGCGATTGGAACACTTGCATTGTGCTATAACAATGTACAAGTATTTAGAGGCGTGGTGAAACTGAGGCGAGGTCTAACTGCCAAAGTCATTGATCGGACAAAAACAATGGCTGATGTCTATGGTGCTTTCTATGATTTCTCTTGCATGCTAAAAACAAAGGTTGACAAGAACGATCCGAATGCCAGTATGACGCTAAACCGGCTTGAAGCAGTTCAGAAAGTCTGCAGAGACACTGGAGTCCTTCATAAGAGAAAATCTTATATTAATGACAAAGGACGATCATACAATGTCTATATTGTAATGCTTGTGATTCTACTTGCCATAGTCTTTGCATATCTCAGAGCAAACTGA |
| Protein: MGSLGTFLRYPDDVYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLGTDLRNAVCVFYLVLRALDTVEDDTSIPTDEKLPILIAFHRHIYDTDWHYSCGTKEYKVLMDQFHHVAAAFLELEKGYQEAIEEITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFLASGSEVLLPDWEQISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRKIWGKYADKLEDLKYEENSTKAVHCLNEMVTNALTHIEDCLKYMAALRDPSIFRFCAIPQIMAIGTLALCYNNVQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASMTLNRLEAVQKVCRDTGVLHKRKSYINDKGRSYNVYIVMLVILLAIVFAYLRAN |